PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.0389s0210.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family C2H2
Protein Properties Length: 407aa    MW: 44232.1 Da    PI: 9.5447
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.0389s0210.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.10.00014172193323
                             ETTTTEEESSHHHHHHHHHH.T CS
                 zf-C2H2   3 CpdCgksFsrksnLkrHirt.H 23 
                             C+ Cg++F+  ++L+ H+++ H
  SapurV1A.0389s0210.1.p 172 CTQCGEVFPKIESLELHQKVrH 193
                             *******************988 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS501579.556170198IPR007087Zinc finger, C2H2
PROSITE patternPS000280172193IPR007087Zinc finger, C2H2
SuperFamilySSF563994.6E-24195404No hitNo description
Gene3DG3DSA:3.90.228.102.5E-12196404IPR012317Poly(ADP-ribose) polymerase, catalytic domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003950Molecular FunctionNAD+ ADP-ribosyltransferase activity
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 407 aa     Download sequence    Send to blast
MAALTFLQEH KETREKNPSR SKRKLQKEKE KEKQPSSWDQ IKNLLTCKQI EGSRVHDPSK  60
NPNGHSKFGS SCSSICSFKA VVHGNTRVVH RADNSPESST VGQETGLLSR KDGSTRSSST  120
RSLAASGRSN GGVTYSSSSR GMQFRKLSGC YECHMIVDPS RCPSARTTIS ACTQCGEVFP  180
KIESLELHQK VRHAVSELAP EDSGRNIVEI IFKSSWVRKD NPGCKIERIL KVNNTQRTIQ  240
RFEECRDAVK TRALSSTRKN PRCAADGNEL LRFHCTTLTC SLGSRGSSSL CGSIPGCGIC  300
TIIRHGFQGK GCKGVLTTAS SGRAHDSFRG CTDERRAMLV CRVIAGRVKR VAEDAPPSEE  360
DGATSAAAGS YDSVAGYAGI YSSLEELSVF NPRAILPCFV VIYKAL*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002306922.20.0hypothetical protein POPTR_0005s25950g
TrEMBLB9H4W10.0B9H4W1_POPTR; Uncharacterized protein
STRINGPOPTR_0005s25950.10.0(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF103413037
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75710.11e-142C2H2-like zinc finger protein